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I had a similar thing happen to a site I was hosting. I basically changed all my passwords related to that server (FTP, back-end logins, registrar) and it stopped happening. At first I just erased the code but it kept coming. But changing every password that is somehow related to the server fixed the problem.
If you are paying for your hosting package, or receiving your free hosting from a reputable company, than I strongly doubt it's them.
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